Browse of TCMCG015C06808 protein

CDS

Accession Number	TCMCG015C06808
gbkey	CDS
Protein Id	XP_027103906.1
Location	complement(join(3070248..3070362,3071167..3071549,3072009..3072194,3072943..3073119,3073309..3073440,3073590..3073808,3074043..3074120,3074277..3074342,3074422..3074502,3074895..3075679,3076397..3076593,3077930..3078024,3078770..3078910,3079842..3079919,3080168..3080296,3080579..3080713,3080948..3081067,3081146..3081197,3082073..3082204,3082569..3082621,3082720..3082815,3083997..3084142,3085022..3085157,3086277..3086430,3087005..3087151,3087272..3087600))
Gene	LOC113725116
GeneID	113725116
Organism	Coffea arabica

Protein

Length	1453aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA506972
db_source	XM_027248105.1
Definition	cleavage and polyadenylation specificity factor subunit 1-like [Coffea arabica]

EGGNOG-MAPPER Annotation

COG_category	A
Description	Cleavage and polyadenylation specificity factor
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03019        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K14401        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko03015        [VIEW IN KEGG] map03015        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003723        [VIEW IN EMBL-EBI] GO:0003729        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005829        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006378        [VIEW IN EMBL-EBI] GO:0006379        [VIEW IN EMBL-EBI] GO:0006396        [VIEW IN EMBL-EBI] GO:0006397        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016071        [VIEW IN EMBL-EBI] GO:0031123        [VIEW IN EMBL-EBI] GO:0031124        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043631        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0090305        [VIEW IN EMBL-EBI] GO:0090501        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGAGCTTCGCAGCGTGCAAGATGATGCACCCTCCCACAGGCATCGACAACTGCGCCTCCGGCTTCATTACTCACTCCGTCGCCGATTTCACTCCAAAATTCCCTCCAATCCAAACCGACGATCTGGACTCGGACTGGCCCTCTACTCCCAAGCCCATTGGCCCCCTCCCCAATCTCATTCTCACTTCCGCTAATGTTCTCGAGCTTTACACCCTTAGGCTTCTAGAGGAAGCTGCTTCCAGAGACTCCAAAACGCCCATTGAAGCCCAACGGGGCGGCGTCCTCGCTGGTATCTCTGGCGCTTCTCTAGAACTCGTCTGCCATTACAGACTGCATGGCAATGTGGAGTCCATGGGGATTTTATCATCGGGAGGCATTGATGGTGGGAAGAGGAGGGATTCAATTATCCTAACTTTCCAAGATGCTAAGATGTCAGTTTTGGAGTTTGATGATTCTATTCACGGGCTACGCACAAGCTCACTGCACTGTTTCGAAGGTCCAGATTGGCACCATCTTAAAAGAGGTAGAGAATCTTTTGCCAGAGGTCCATTAGTGAAGGTTGATCCGCAGGGAAGGTGTGCTGGAGTTCTTGTTTATGGTCTACAAATGGTCGTGCTCAAGGCTGCTGAGGCCACCTCTGGTTTAGTCAGTGAGGATAATGCTTCTAGTGCGGGAGGTGCAGTTTCTGCTCGCATTGAGTCATCATATATAATTAGTCTGAGAGATCTGGATATGAAGCACATAAAAGATTTTATATTTATCAATGGTTACATTGAGCCTGTGATGGTTATTCTTCATGAACGGGAGCTTACTTGGGCAGGGCGCGTCTCCTGGAAACATCACACTTGCATGATATCAGCACTTAGTATCAGCACAACATTGAGGCAGCATCCACTGATTTGGTCGGCCACTAATCTGCCTCATGATGCCTACAAGCTTCTTGCAGTGCCATCTCCTATTGGTGGAGTCCTTGTCCTCTGTGCTAATACTATTCACTATCATAGTCAGTCAACATCATGTGTACTTGCTTTGAACAACTATGCTGTTCCTATGGATAGCAGTCAAGAGATGCCAAGGTCCAATTTTATTGTGGAGCTTGATGCTGCAAACGCAACCTGGTTAACAAATGATGTAGCTATGCTGTCAGCAAAAACTGGGGAATTGCTTTTACTTACACTAATTCATGACGGGAGAATTGTTCAGAGATTGGAGCTTTCAAAGTCAAGAGCTTCAGTGCTTACTTCAGGTCTCACAACCGTTGGAAGTTCATTTGTATTTCTAGGTAGTCGTTTAGGTGACAGTATACTGGTACAGTTTACTTGTGGAGTCGGGGTGTCAGCGTTGCCCCTTGGTGCAAAGGAAGAGGTTGGAGATATTGAAGGTGATCTCCCTTCAGCAAAGCGGCTCCGAAGGTCTTCGTCTGATGCTTTGCAGGATATGGTGAATGGTGAAGAACTTTCCTTGTATGGTTCACATCCGAACAATGCACAGTCTGCCCAGAAGGCTTTTTCTTTTGCTGTGAGAGATTCCCTAACGAATGTTGGGCCGCTAAAGGACTTCTCTTATGGTTTGAGAATCAATGCTGACCCAAATGCTACTGGCATTGCTAAGCAAAGTAATTATGAACTGGTTTGCTGCTCTGGTCATGGCAAAAATGGTGCTCTTTGTGTGCTTCAGAAGTCTATCCGCCCAGAAATGATTACCCATGAATCAATACCAGGTTGCAAGGGAGTTTGGACAGTATACCACAAGAATGCACGCAGTCATGTGGTTGATTCATCAAAGGTCACAGCTGATGACGATGAATATCATGCATATTTGATTATCAGTTTGGAGACTCGTACAATGGTACTGCAGTCGGCTAATAATTTAGAGGAGGTTACCGAAAATGTTGACTATTATACCCAAGGATGTACTATTGCTGCTGGAAATTTGTTTGGAAGGCGTCTGGTCATCCAAATCTATGCTTATGGTGCTCGACTTCTTGATGGTGGGTTTATGGTTCAAGAACTGAACTTTAGGCCTCCGAATTCTGAAATTGGACCTAGTTCTGAAAGTCAAAAAGTGGCATCTGTTTCTATAGCTGATCCATATGTATTGCTGAGAATGATCGATGGAAGTATTTACCTTCTTCTCGGAGATCCATCCAGTTGCACTCTCACCACCACCAATCCAGAAGTATTTGAAAGCTCAAAGAATCTAATAACTGCTTGCACACTCTATCACGACAAAGGCCCAGAGCCATGGCTGCGGAAGACGAGTACTGATGCTTGGCTTTCTACAGGCATTGGGGAGGCAATTGATGGGTCTGATGGTGCCTCCCATGATCTGGGGGATGTATACTGTATTGTTTGCTATCAAAGTGGTGGGCTTGAGATATTTGATGTGCCTAATTTTACTTGTGTATTTTCTGTGGAAAATTTTGCATCCGGGAAAGCAATCCTCATGGACACATTTTCTCCCCACCCAGCCAAAAGTAATCAGGAAGTTGTGCAAATGATTGAGGATGTGAATGCACAAGAAAGGAAAGACAATAGTCAGAAAATAGGGGTTGTGGAATTGGCCATGCATAAGTGGGCTGGGCAACATAGCCGCCCTTTTCTTTTTGGAATATTGTCAGATGGAACAATTCTTTGCTACCATGCGTTTGTTTTTGAAAATTCAGATACTGGAAGTAGAGATGAGAAACCTGTTATTTCCCAGAACTCTGGTAATCTTAGCAGTATGAATGGTTCTAGGCTTAGAAATTTGAGATTCATCCGCATCTCATTGGACACTTATGCTAGGGACGAGATACCATCTGGAACCCCATCTAAACGTTTGACCATTTTCAAGAATGTTGGTGGATTCCAAGGTTTGTTTCTCTCTGGGTCCAGACCCACTTGGTTCATGATGTTCAGGGAACGGCTTAGGACACATCCACAGCTTTGTGATGGACCTATTGTTGCTTTCACTGTTCTTCACAATGTGAACTGTAATCATGGGTTTATATACGTTACCTCTCAGGGTACACTGAAGATTTGTCAACTTCCATCCTCCTTACTATATGACAATTATTGGCCAGTACAAAAGACAACTTTGAAGGGGACTCCTCATCAGGTCACTTATTTTGCTGAGAAGAATTTGTATCCCCTGATAGTATCATATCCAGTCCTTAAGCCGCTAAACCAAGTTCTTTCCTCTCTTGTTGATCAAGAAGTTGGTCACCAGCTTGAGAATGAGACTATGAATTTTGAAGGGATGTATCCTGTAGAAGAATTTGAGATCCGCATTATGGAACCAGAAAATTCCAGGCCTTGGCAAACAAGAGCTACAATACCAATGCAAAGTTCTGAAAACGCTCTGACTGTACGAGCGGTTACTTTGTTTAATTGCACAACAAGAGAAAATGAAACTCTTTTGGCAGTTGGAACTGCTTATGTACAAGGAGAGGATGTTGCAGCAAGAGGGCGTATTCTCTTGTTTTCAATTGAAAGAAGTGCTGACAATTCTCAAATTTTAGTTTCAGAAGTTTACGCCAAAGAATTGAAAGGCGCCATATCTGCTCTAGCATCTCTCCAAGGCCATTTGCTGATAGCATCTGGTCCTAAGATTATTTTACATGAGTGGACGGGTTCTGAATTAAATGGTGTTGCCTTCTACGACGTTCCTCCTCTTTATGTTGTGAGCTTAAATATTGTTAAGAATTTTATTCTTCTTGGAGACATTCACAAAAGCATTTACTTTTTGAGTTGGAAGGAGCAAGGATCTCAGCTTAATCTATTGGCTAAGGACTTTGGTTCTCTTGATTGTCTGGCAACAGAATTTTTAATTGATGGAAATACACTGAGTCTTATGGTTTCAGATGACCAAAAGAATGTTCAGGTCTTTTCTTATTCTCCCAAGTTGTCAGAGAGTTGGAAAGGGCAGAAGCTTTTGTCCAGGGCTGAGTTTCATATTGGTGCTCATGTCACTAAGTTTTTGCGATTGCATCTGCTTCCAACATCCCCTGATCGAACTAATACTCCTGGGTCTGATAAGACAAATCGTTTTGGTCTACTTTTTGGTACCCTAGATGGGAGCATTGGCTGTGTTGCACCTCTTGATGAACTAACATTTCGGAGGCTCCAGTCACTGCAGAAAAAGCTTGTAGATGCTGTTTCTCATGTTGCTGGTTTGAACCCAAGATCTTTTCGGCAATTCCGTTCTAATGGAAGGGCTCATAGGCCTGGTCCTGATAGTATAGTCGACTGTGAGCTGCTTTGCCATTATGAAATGCTTCCCTTGGAAGAGCAGCTTGAAATTGCTCACCAGATTGGAACCACTCGTATGCAGATCATATCCAACTTAAATGAACTCACTCTGGGGACCAGCTTCTTATGA

Protein:   MSFAACKMMHPPTGIDNCASGFITHSVADFTPKFPPIQTDDLDSDWPSTPKPIGPLPNLILTSANVLELYTLRLLEEAASRDSKTPIEAQRGGVLAGISGASLELVCHYRLHGNVESMGILSSGGIDGGKRRDSIILTFQDAKMSVLEFDDSIHGLRTSSLHCFEGPDWHHLKRGRESFARGPLVKVDPQGRCAGVLVYGLQMVVLKAAEATSGLVSEDNASSAGGAVSARIESSYIISLRDLDMKHIKDFIFINGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLRQHPLIWSATNLPHDAYKLLAVPSPIGGVLVLCANTIHYHSQSTSCVLALNNYAVPMDSSQEMPRSNFIVELDAANATWLTNDVAMLSAKTGELLLLTLIHDGRIVQRLELSKSRASVLTSGLTTVGSSFVFLGSRLGDSILVQFTCGVGVSALPLGAKEEVGDIEGDLPSAKRLRRSSSDALQDMVNGEELSLYGSHPNNAQSAQKAFSFAVRDSLTNVGPLKDFSYGLRINADPNATGIAKQSNYELVCCSGHGKNGALCVLQKSIRPEMITHESIPGCKGVWTVYHKNARSHVVDSSKVTADDDEYHAYLIISLETRTMVLQSANNLEEVTENVDYYTQGCTIAAGNLFGRRLVIQIYAYGARLLDGGFMVQELNFRPPNSEIGPSSESQKVASVSIADPYVLLRMIDGSIYLLLGDPSSCTLTTTNPEVFESSKNLITACTLYHDKGPEPWLRKTSTDAWLSTGIGEAIDGSDGASHDLGDVYCIVCYQSGGLEIFDVPNFTCVFSVENFASGKAILMDTFSPHPAKSNQEVVQMIEDVNAQERKDNSQKIGVVELAMHKWAGQHSRPFLFGILSDGTILCYHAFVFENSDTGSRDEKPVISQNSGNLSSMNGSRLRNLRFIRISLDTYARDEIPSGTPSKRLTIFKNVGGFQGLFLSGSRPTWFMMFRERLRTHPQLCDGPIVAFTVLHNVNCNHGFIYVTSQGTLKICQLPSSLLYDNYWPVQKTTLKGTPHQVTYFAEKNLYPLIVSYPVLKPLNQVLSSLVDQEVGHQLENETMNFEGMYPVEEFEIRIMEPENSRPWQTRATIPMQSSENALTVRAVTLFNCTTRENETLLAVGTAYVQGEDVAARGRILLFSIERSADNSQILVSEVYAKELKGAISALASLQGHLLIASGPKIILHEWTGSELNGVAFYDVPPLYVVSLNIVKNFILLGDIHKSIYFLSWKEQGSQLNLLAKDFGSLDCLATEFLIDGNTLSLMVSDDQKNVQVFSYSPKLSESWKGQKLLSRAEFHIGAHVTKFLRLHLLPTSPDRTNTPGSDKTNRFGLLFGTLDGSIGCVAPLDELTFRRLQSLQKKLVDAVSHVAGLNPRSFRQFRSNGRAHRPGPDSIVDCELLCHYEMLPLEEQLEIAHQIGTTRMQIISNLNELTLGTSFL